BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G12SP1|AL429809
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1072 1805 0.0
>3x_Contig1072
Length = 5702
Score = 1805 bits (910), Expect = 0.0
Identities = 918/920 (99%), Gaps = 1/920 (0%)
Strand = Plus / Minus
Query: 1 gatctataagtgaagcgcncaacattgctcaaagatctagaaccgtctatgctcctgata 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4062 gatctataagtgaagcgc-caacattgctcaaagatctagaaccgtctatgctcctgata 4004
Query: 61 gactgttccattatgtatcaatctcttttccgtatggtcttttgcgtgtcatagaactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4003 gactgttccattatgtatcaatctcttttccgtatggtcttttgcgtgtcatagaactaa 3944
Query: 121 tttcaatgtttcgcgtgtcatattcatcattgagtaggctaatgttagctagataactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3943 tttcaatgtttcgcgtgtcatattcatcattgagtaggctaatgttagctagataactgt 3884
Query: 181 tttcattatttgaaaaattcaaaaagtaatagaagataaacaagtttatactttgaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 tttcattatttgaaaaattcaaaaagtaatagaagataaacaagtttatactttgaatta 3824
Query: 241 gctacttggataggaaaagtctcgtcattgacctagcaactgtaactcgtattgttacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3823 gctacttggataggaaaagtctcgtcattgacctagcaactgtaactcgtattgttacga 3764
Query: 301 taaatcgagcactttgttgtattgttagaaaccatttagcaaaaatggcaccattaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3763 taaatcgagcactttgttgtattgttagaaaccatttagcaaaaatggcaccattaagac 3704
Query: 361 aagacagttacttcgtatgtgcggtatccagattgttcattattccgaaaacattagtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3703 aagacagttacttcgtatgtgcggtatccagattgttcattattccgaaaacattagtta 3644
Query: 421 tttaaactactaagataactttactaaccgatccactcacattactacatgtggtacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3643 tttaaactactaagataactttactaaccgatccactcacattactacatgtggtacttt 3584
Query: 481 tgtccagataatatatccaggatccaataggactttggttcaatttggtattggagaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3583 tgtccagataatatatccaggatccaataggactttggttcaatttggtattggagaaga 3524
Query: 541 tactttgcagccgccttcgatttctattccaacaaaagtttacagagatgcaaatggtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3523 tactttgcagccgccttcgatttctattccaacaaaagtttacagagatgcaaatggtaa 3464
Query: 601 ctttacatcctctgttactgatgttgttatctgtcccattgtgaagggaagcattgtcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3463 ctttacatcctctgttactgatgttgttatctgtcccattgtgaagggaagcattgtcga 3404
Query: 661 tattgatgcgttccaatattttctaaagttgatctataaatctgtgttaaaacaggagag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3403 tattgatgcgttccaatattttctaaagttgatctataaatctgtgttaaaacaggagag 3344
Query: 721 tgacgatagtccaatcgcttgggatacagctctttctaatattccatttttgttaatttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3343 tgacgatagtccaatcgcttgggatacagctctttctaatattccatttttgttaatttc 3284
Query: 781 gcattactcttggactcaattccaacaagaactactttgcagaacagcttttgaagcaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3283 gcattactcttggactcaattccaacaagaactactttgcagaacagcttttgaagcaat 3224
Query: 841 gaaattgaagcattttgttatattacctagctcgttagctaattcatttgcctatggckc 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3223 gaaattgaagcattttgttatattacctagctcgttagctaattcatttgcctatggctc 3164
Query: 901 tttgcaaaattgtttgatca 920
||||||||||||||||||||
Sbjct: 3163 tttgcaaaattgtttgatca 3144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7558
Number of Sequences: 1807
Number of extensions: 7558
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)